Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | AMED_RS03430 | Not Available | Positive | 728847 - 730088 | 40408.7 |
| zinc ribbon domain-containing protein | AMED_RS03435 | Not Available | Positive | 730150 - 730791 | 23193.8 |
| crp/fnr family transcriptional regulator | AMED_RS03440 | Not Available | Positive | 731055 - 731723 | 24292.7 |
| hypothetical protein | AMED_RS03445 | Not Available | Positive | 731864 - 732571 | 24788.2 |
| hypothetical protein | AMED_RS03450 | Not Available | Positive | 732568 - 734589 | 73526.1 |
| hypothetical protein | AMED_RS03455 | Not Available | Positive | 734586 - 735977 | 53953.9 |
| duf4407 domain-containing protein | AMED_RS03460 | Not Available | Positive | 735967 - 737307 | 49504.1 |
| hypothetical protein | AMED_RS03465 | Not Available | Positive | 737374 - 737598 | 7489.38 |
| hypothetical protein | AMED_RS03470 | Not Available | Negative | 737579 - 737860 | 9789.59 |
| hypothetical protein | AMED_RS03475 | Not Available | Negative | 738041 - 738376 | 12536.3 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
