Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crtac1 family protein | AMED_RS35100 | Not Available | Negative | 7581775 - 7583748 | 70687.4 |
| duf1702 family protein | AMED_RS35105 | Not Available | Negative | 7583745 - 7584728 | 36312.1 |
| duf1702 family protein | AMED_RS35110 | Not Available | Negative | 7584829 - 7585824 | 36201.9 |
| arac family transcriptional regulator | AMED_RS35115 | Not Available | Negative | 7585856 - 7586677 | 28985.2 |
| afsr/sarp family transcriptional regulator | AMED_RS35120 | Not Available | Positive | 7587270 - 7588085 | 30211.9 |
| winged helix-turn-helix transcriptional regulator | AMED_RS35125 | Not Available | Positive | 7588123 - 7588821 | 25095.4 |
| rna polymerase sigma factor | AMED_RS35130 | Not Available | Negative | 7588832 - 7590076 | 44849.4 |
| ycii family protein | AMED_RS35135 | Not Available | Negative | 7590073 - 7590456 | 13793.7 |
| maleylpyruvate isomerase family mycothiol-dependent enzyme | AMED_RS35140 | Not Available | Positive | 7590610 - 7591275 | 24498.8 |
| l-threonylcarbamoyladenylate synthase | AMED_RS35145 | Not Available | Negative | 7591279 - 7591899 | 22774.3 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
