Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | AMED_RS35050 | Not Available | Negative | 7566881 - 7567912 | 35144.3 |
| flavin reductase family protein | AMED_RS35055 | Not Available | Negative | 7567926 - 7568498 | 20017.7 |
| thioesterase family protein | AMED_RS35060 | Not Available | Negative | 7568500 - 7568952 | 17284.7 |
| type i polyketide synthase | AMED_RS35065 | Not Available | Negative | 7568955 - 7574783 | 205045.0 |
| tigr03084 family metal-binding protein | AMED_RS35070 | Not Available | Negative | 7575031 - 7575837 | 29064.5 |
| carboxymuconolactone decarboxylase family protein | AMED_RS35075 | Not Available | Negative | 7576028 - 7577101 | 36918.4 |
| gmc family oxidoreductase | AMED_RS35080 | Not Available | Negative | 7577146 - 7578798 | 59345.0 |
| duf5987 family protein | AMED_RS35085 | Not Available | Negative | 7578795 - 7579364 | 20323.8 |
| cytochrome p450 | AMED_RS35090 | Not Available | Negative | 7579399 - 7580772 | 50397.6 |
| hypothetical protein | AMED_RS35095 | Not Available | Negative | 7580769 - 7581773 | 36414.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
