Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sgcj/ecac family oxidoreductase | AMED_RS34955 | Not Available | Positive | 7551263 - 7551721 | 16385.3 |
| sgcj/ecac family oxidoreductase | AMED_RS34960 | Not Available | Positive | 7551746 - 7552201 | 16256.4 |
| peroxiredoxin | AMED_RS34965 | Not Available | Negative | 7552452 - 7552916 | 16841.9 |
| sgcj/ecac family oxidoreductase | AMED_RS34970 | Not Available | Negative | 7552929 - 7553399 | 17325.3 |
| sgcj/ecac family oxidoreductase | AMED_RS34975 | Not Available | Negative | 7553414 - 7553872 | 16385.3 |
| duf899 family protein | AMED_RS34980 | Not Available | Negative | 7553992 - 7554642 | 24960.5 |
| aldehyde dehydrogenase | AMED_RS34985 | Not Available | Negative | 7554664 - 7556109 | 50914.5 |
| mfs transporter | AMED_RS34990 | Not Available | Negative | 7556180 - 7557628 | 49286.2 |
| epoxide hydrolase family protein | AMED_RS34995 | Not Available | Negative | 7557724 - 7558887 | 43039.6 |
| acyl-coa dehydrogenase family protein | AMED_RS35000 | Not Available | Negative | 7559021 - 7560199 | 42665.6 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
