Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | AMED_RS34910 | Not Available | Negative | 7538236 - 7539417 | 38878.9 |
| peptidase inhibitor family i36 protein | AMED_RS34915 | Not Available | Positive | 7539622 - 7540005 | 13718.2 |
| Trna-arg | Not Available | Not Available | Positive | 7540762 - 7540838 | Not Available |
| hypothetical protein | AMED_RS49590 | Not Available | Negative | 7542159 - 7542293 | 5195.18 |
| aspartate aminotransferase family protein | AMED_RS34925 | Not Available | Negative | 7542408 - 7543784 | 49628.4 |
| gmc family oxidoreductase | AMED_RS34930 | Not Available | Negative | 7543799 - 7545376 | 56712.7 |
| apc family permease | AMED_RS34935 | Not Available | Negative | 7545428 - 7546906 | 51267.2 |
| nad(p)/fad-dependent oxidoreductase | AMED_RS34940 | Not Available | Negative | 7546921 - 7548297 | 48960.0 |
| acyl-coa dehydrogenase family protein | AMED_RS34945 | Not Available | Positive | 7548448 - 7549623 | 42674.2 |
| gmc family oxidoreductase | AMED_RS34950 | Not Available | Positive | 7549643 - 7551184 | 55079.0 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
