Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 13 protein | AMED_RS34860 | Not Available | Positive | 7520535 - 7522085 | 57206.4 |
| hypothetical protein | AMED_RS34865 | Not Available | Negative | 7522224 - 7522472 | 8883.05 |
| hypothetical protein | AMED_RS34870 | Not Available | Negative | 7522588 - 7523223 | 22448.9 |
| thioesterase family protein | AMED_RS34875 | Not Available | Negative | 7523216 - 7523635 | 15355.6 |
| nad-glutamate dehydrogenase | AMED_RS34880 | Not Available | Negative | 7523632 - 7528638 | 183639.0 |
| hypothetical protein | AMED_RS34885 | Not Available | Negative | 7529457 - 7532333 | 101609.0 |
| energy-dependent translational throttle protein etta | AMED_RS34890 | Not Available | Negative | 7532350 - 7534026 | 62605.5 |
| cytochrome c oxidase assembly protein | AMED_RS34895 | Not Available | Negative | 7534174 - 7536183 | 71043.9 |
| histidine phosphatase family protein | AMED_RS34900 | Not Available | Positive | 7536241 - 7536879 | 24513.1 |
| sensor histidine kinase | AMED_RS34905 | Not Available | Negative | 7536853 - 7538025 | 40872.1 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
