Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mbl fold metallo-hydrolase | AMED_RS34810 | Not Available | Positive | 7511186 - 7511995 | 29092.0 |
| dsba family protein | AMED_RS34815 | Not Available | Negative | 7512003 - 7512623 | 23131.3 |
| aminopeptidase n | AMED_RS34820 | Not Available | Positive | 7512777 - 7515344 | 94424.4 |
| hypothetical protein | AMED_RS34825 | Not Available | Negative | 7515444 - 7516229 | 28673.3 |
| duf5130 family protein | AMED_RS34830 | Not Available | Negative | 7516671 - 7517159 | 17039.3 |
| hypothetical protein | AMED_RS34835 | Not Available | Negative | 7517146 - 7517394 | 8662.27 |
| hypothetical protein | AMED_RS34840 | Not Available | Positive | 7517673 - 7518044 | 12995.7 |
| hnh endonuclease | AMED_RS34845 | Not Available | Negative | 7518203 - 7518700 | 18365.6 |
| mechanosensitive ion channel family protein | AMED_RS34850 | Not Available | Positive | 7519095 - 7520045 | 33868.8 |
| globin | AMED_RS34855 | Not Available | Positive | 7520137 - 7520538 | 15512.5 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
