Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | AMED_RS34760 | Not Available | Positive | 7502668 - 7503033 | 13984.8 |
| carbohydrate-binding protein | AMED_RS34765 | Not Available | Negative | 7503077 - 7504645 | 54465.7 |
| nuclear transport factor 2 family protein | AMED_RS34770 | Not Available | Negative | 7504764 - 7505210 | 16071.6 |
| tigr03619 family f420-dependent llm class oxidoreductase | AMED_RS34775 | Not Available | Negative | 7505216 - 7506091 | 32005.2 |
| hypothetical protein | AMED_RS34780 | Not Available | Positive | 7506239 - 7507066 | 28595.0 |
| tetr/acrr family transcriptional regulator | AMED_RS34785 | Not Available | Negative | 7507110 - 7507730 | 21799.9 |
| chaperonin groel | AMED_RS34790 | Not Available | Positive | 7507816 - 7509417 | 55694.9 |
| fpg/nei family dna glycosylase | AMED_RS34795 | Not Available | Negative | 7509428 - 7510234 | 29430.5 |
| ribose-5-phosphate isomerase | AMED_RS34800 | Not Available | Negative | 7510234 - 7510707 | 17005.9 |
| hypothetical protein | AMED_RS34805 | Not Available | Positive | 7510753 - 7511001 | 8620.32 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
