Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotidyltransferase | AMED_RS34710 | Not Available | Positive | 7493952 - 7494830 | 32578.5 |
| sdr family oxidoreductase | AMED_RS34715 | Not Available | Negative | 7495508 - 7496443 | 32184.2 |
| nadph-dependent f420 reductase | AMED_RS34720 | Not Available | Negative | 7496453 - 7497073 | 20326.4 |
| lysr family transcriptional regulator | AMED_RS34725 | Not Available | Positive | 7497212 - 7498123 | 32633.9 |
| tetr/acrr family transcriptional regulator | AMED_RS34730 | Not Available | Negative | 7498128 - 7498730 | 21771.9 |
| sdr family nad(p)-dependent oxidoreductase | AMED_RS34735 | Not Available | Positive | 7498845 - 7499579 | 26090.8 |
| nadph-dependent f420 reductase | AMED_RS34740 | Not Available | Positive | 7499627 - 7500250 | 20754.8 |
| tigr03619 family f420-dependent llm class oxidoreductase | AMED_RS34745 | Not Available | Positive | 7500264 - 7501154 | 32194.4 |
| hypothetical protein | AMED_RS34750 | Not Available | Positive | 7501311 - 7501739 | 14707.4 |
| nad(p)h-binding protein | AMED_RS34755 | Not Available | Negative | 7501804 - 7502601 | 27455.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
