Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-pro | Not Available | Not Available | Positive | 7485469 - 7485545 | Not Available |
| hypothetical protein | AMED_RS34665 | Not Available | Positive | 7485601 - 7486020 | 14649.3 |
| hypothetical protein | AMED_RS34670 | Not Available | Negative | 7486662 - 7487054 | 13803.6 |
| methyltransferase domain-containing protein | AMED_RS34675 | Not Available | Negative | 7487260 - 7488435 | 42739.4 |
| atp-grasp ribosomal peptide maturase | AMED_RS34680 | Not Available | Negative | 7488432 - 7489403 | 34663.9 |
| hypothetical protein | AMED_RS34685 | Not Available | Negative | 7489433 - 7489678 | 8579.8 |
| helix-turn-helix domain-containing protein | AMED_RS34690 | Not Available | Negative | 7489889 - 7491088 | 43299.8 |
| had family hydrolase | AMED_RS34695 | Not Available | Positive | 7491178 - 7491894 | 25544.2 |
| smods domain-containing nucleotidyltransferase | AMED_RS34700 | Not Available | Negative | 7491965 - 7492843 | 32527.6 |
| s-4tm family putative pore-forming effector | AMED_RS34705 | Not Available | Negative | 7492827 - 7493789 | 35510.6 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
