Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine pyrophosphate-dependent enzyme | AMED_RS03380 | Not Available | Positive | 711265 - 711957 | 24531.0 |
| transketolase family protein | AMED_RS03385 | Not Available | Positive | 711954 - 712865 | 33009.3 |
| cytochrome p450 | AMED_RS03390 | Not Available | Negative | 713126 - 714388 | 46461.7 |
| type ii 3-dehydroquinate dehydratase | AMED_RS03395 | Not Available | Positive | 714576 - 715031 | 16273.5 |
| helix-turn-helix transcriptional regulator | AMED_RS03400 | Not Available | Positive | 715658 - 716872 | 43726.0 |
| dna-directed rna polymerase subunit beta | AMED_RS03405 | Not Available | Positive | 717901 - 721404 | 129381.0 |
| dna-directed rna polymerase subunit beta' | AMED_RS03410 | Not Available | Positive | 721503 - 725414 | 144269.0 |
| hypothetical protein | AMED_RS03415 | Not Available | Positive | 725582 - 727348 | 60601.1 |
| m15 family metallopeptidase | AMED_RS03420 | Not Available | Negative | 727406 - 728191 | 29446.1 |
| lrp/asnc family transcriptional regulator | AMED_RS03425 | Not Available | Negative | 728251 - 728751 | 18685.3 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
