Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS00250 | Not Available | Positive | 50578 - 51219 | 22860.0 |
| effector-associated constant component eacc1 | AMED_RS00255 | Not Available | Positive | 51320 - 51637 | 11302.4 |
| stk1 family pasta domain-containing ser/thr kinase | AMED_RS00260 | Not Available | Negative | 51698 - 53674 | 70722.6 |
| serine/threonine-protein kinase | AMED_RS00265 | Not Available | Negative | 53671 - 55017 | 47367.1 |
| penicillin-binding protein 2 | AMED_RS00270 | Not Available | Negative | 55021 - 56490 | 51382.0 |
| ftsw/roda/spove family cell cycle protein | AMED_RS00275 | Not Available | Negative | 56487 - 57974 | 52602.5 |
| pp2c family serine/threonine-protein phosphatase | AMED_RS00280 | Not Available | Negative | 57974 - 59371 | 48984.7 |
| fha domain-containing protein | AMED_RS00285 | Not Available | Negative | 59368 - 59829 | 16975.8 |
| duf3662 and fha domain-containing protein | AMED_RS00290 | Not Available | Negative | 59930 - 61165 | 43756.3 |
| Trna-leu | Not Available | Not Available | Positive | 61296 - 61378 | Not Available |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
