Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldo/keto reductase | AMED_RS34610 | Not Available | Positive | 7473338 - 7474171 | 30506.1 |
| sam-dependent methyltransferase | AMED_RS34615 | Not Available | Negative | 7474279 - 7475118 | 30806.4 |
| hypothetical protein | AMED_RS34620 | Not Available | Negative | 7475260 - 7476363 | 37409.9 |
| helix-turn-helix domain-containing protein | AMED_RS34625 | Not Available | Negative | 7476855 - 7477280 | 15075.2 |
| hypothetical protein | AMED_RS34630 | Not Available | Positive | 7477437 - 7477847 | 14795.1 |
| hypothetical protein | AMED_RS34635 | Not Available | Negative | 7477909 - 7478109 | 7245.47 |
| type 1 glutamine amidotransferase domain-containing protein | AMED_RS34640 | Not Available | Negative | 7478263 - 7478805 | 19254.8 |
| spoiie family protein phosphatase | AMED_RS34645 | Not Available | Negative | 7478952 - 7480529 | 54763.9 |
| hamp domain-containing protein | AMED_RS34650 | Not Available | Positive | 7480669 - 7485309 | 164794.0 |
| Trna-gly | Not Available | Not Available | Positive | 7485315 - 7485388 | Not Available |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
