Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase | AMED_RS34560 | Not Available | Negative | 7460129 - 7461577 | 51164.6 |
| abc transporter permease | AMED_RS34565 | Not Available | Negative | 7461829 - 7463391 | 53150.7 |
| abc transporter atp-binding protein | AMED_RS34570 | Not Available | Negative | 7463388 - 7464299 | 32846.3 |
| tetr/acrr family transcriptional regulator | AMED_RS34575 | Not Available | Negative | 7464302 - 7464916 | 22300.7 |
| s8 family serine peptidase | AMED_RS34580 | Not Available | Positive | 7465153 - 7468386 | 110279.0 |
| rok family transcriptional regulator | AMED_RS34585 | Not Available | Negative | 7468433 - 7469596 | 39654.8 |
| xylose isomerase | AMED_RS34590 | Not Available | Positive | 7469693 - 7470841 | 42371.1 |
| thua domain-containing protein | AMED_RS34595 | Not Available | Negative | 7470855 - 7471505 | 23330.1 |
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS34600 | Not Available | Negative | 7471541 - 7472002 | 16356.4 |
| mfs transporter | AMED_RS34605 | Not Available | Positive | 7472130 - 7473314 | 39368.1 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
