Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS34515 | Not Available | Positive | 7450771 - 7451469 | 26090.6 |
| btad domain-containing putative transcriptional regulator | AMED_RS34520 | Not Available | Negative | 7451360 - 7452190 | 29400.5 |
| pp2c family serine/threonine-protein phosphatase | AMED_RS34525 | Not Available | Positive | 7452282 - 7452995 | 24301.6 |
| duf2127 domain-containing protein | AMED_RS34530 | Not Available | Negative | 7453333 - 7453809 | 17208.4 |
| hypothetical protein | AMED_RS34535 | Not Available | Positive | 7453991 - 7454260 | 9611.41 |
| duf6879 family protein | AMED_RS34540 | Not Available | Positive | 7454253 - 7454864 | 23688.0 |
| atp-binding protein | AMED_RS34545 | Not Available | Positive | 7454858 - 7455337 | 17185.3 |
| metal-dependent hydrolase | AMED_RS49075 | Not Available | Positive | 7455841 - 7456890 | 38702.3 |
| zinc finger protein | AMED_RS34550 | Not Available | Negative | 7457334 - 7457537 | 7561.97 |
| gh92 family glycosyl hydrolase | AMED_RS34555 | Not Available | Negative | 7457661 - 7460018 | 85801.6 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
