Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS34465 | Not Available | Negative | 7441802 - 7442566 | 28007.8 |
| helix-turn-helix transcriptional regulator | AMED_RS34470 | Not Available | Negative | 7442581 - 7443798 | 43878.5 |
| hypothetical protein | AMED_RS34475 | Not Available | Positive | 7444263 - 7444433 | 6417.79 |
| crp/fnr family transcriptional regulator | AMED_RS34480 | Not Available | Positive | 7444455 - 7445117 | 23955.0 |
| hypothetical protein | AMED_RS34485 | Not Available | Positive | 7445197 - 7445469 | 10010.3 |
| hypothetical protein | AMED_RS34490 | Not Available | Positive | 7445580 - 7446089 | 18895.3 |
| bifunctional glycosyltransferase family 2/gtra family protein | AMED_RS34495 | Not Available | Positive | 7446184 - 7447440 | 45011.7 |
| glycosyltransferase family 39 protein | AMED_RS34500 | Not Available | Positive | 7447440 - 7449263 | 62378.9 |
| hypothetical protein | AMED_RS34505 | Not Available | Negative | 7449299 - 7450081 | 28506.4 |
| nuclear transport factor 2 family protein | AMED_RS34510 | Not Available | Negative | 7450266 - 7450664 | 14088.6 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
