Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | AMED_RS34420 | Not Available | Negative | 7429680 - 7430270 | 20768.2 |
| fatty acid desaturase | AMED_RS34425 | Not Available | Positive | 7430409 - 7432517 | 76866.1 |
| hypothetical protein | AMED_RS34430 | Not Available | Negative | 7432539 - 7433114 | 17911.5 |
| cell wall metabolism sensor histidine kinase walk | AMED_RS34435 | Not Available | Positive | 7433303 - 7434835 | 53737.9 |
| glycosyltransferase family 39 protein | AMED_RS34440 | Not Available | Positive | 7434936 - 7436780 | 62622.9 |
| metal-dependent hydrolase | AMED_RS49065 | Not Available | Positive | 7436959 - 7437255 | 11164.5 |
| hypothetical protein | AMED_RS49070 | Not Available | Negative | 7437342 - 7438547 | 44095.0 |
| helix-turn-helix domain-containing protein | AMED_RS34450 | Not Available | Negative | 7438544 - 7439617 | 40026.8 |
| thiamine-monophosphate kinase | AMED_RS34455 | Not Available | Negative | 7440167 - 7441219 | 36647.4 |
| dctp deaminase | AMED_RS34460 | Not Available | Negative | 7441203 - 7441805 | 21604.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
