Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase accessory sulfurtransferase fdhd | AMED_RS34370 | Not Available | Positive | 7419561 - 7420385 | 28919.6 |
| carotenoid oxygenase family protein | AMED_RS34375 | Not Available | Negative | 7420382 - 7421821 | 52380.8 |
| tetr/acrr family transcriptional regulator | AMED_RS34380 | Not Available | Positive | 7421893 - 7422600 | 24810.2 |
| alpha/beta hydrolase family protein | AMED_RS34385 | Not Available | Positive | 7422678 - 7423631 | 33741.5 |
| anti-sigma factor rsba family regulatory protein | AMED_RS34390 | Not Available | Negative | 7423773 - 7424693 | 33072.6 |
| hypothetical protein | AMED_RS34395 | Not Available | Negative | 7424746 - 7425156 | 14415.9 |
| atp-dependent clp protease atp-binding subunit clpx | AMED_RS34400 | Not Available | Negative | 7425207 - 7426502 | 47347.9 |
| atp-dependent clp protease proteolytic subunit | AMED_RS34405 | Not Available | Negative | 7426736 - 7427389 | 24360.9 |
| clpp family protease | AMED_RS34410 | Not Available | Negative | 7427415 - 7428020 | 21888.9 |
| trigger factor | AMED_RS34415 | Not Available | Negative | 7428159 - 7429550 | 50929.1 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
