Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| valine--trna ligase | AMED_RS34330 | Not Available | Negative | 7408204 - 7410825 | 96594.5 |
| hypothetical protein | AMED_RS34335 | Not Available | Positive | 7410884 - 7411177 | 10974.2 |
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS34340 | Not Available | Positive | 7411301 - 7411738 | 15870.9 |
| mfs transporter | AMED_RS34345 | Not Available | Positive | 7411804 - 7413105 | 44723.9 |
| fdhf/ydep family oxidoreductase | AMED_RS34350 | Not Available | Positive | 7413148 - 7415487 | 85138.2 |
| hypothetical protein | AMED_RS34355 | Not Available | Negative | 7415478 - 7416002 | 18074.2 |
| lcp family protein | AMED_RS34360 | Not Available | Negative | 7416349 - 7417782 | 49023.3 |
| metal-dependent hydrolase | AMED_RS49060 | Not Available | Negative | 7417834 - 7417959 | 4395.17 |
| hypothetical protein | AMED_RS49585 | Not Available | Negative | 7417984 - 7418109 | 4678.9 |
| ofa family mfs transporter | AMED_RS34365 | Not Available | Negative | 7418109 - 7419458 | 47741.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
