Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside-diphosphate kinase | AMED_RS34280 | Not Available | Negative | 7396897 - 7397307 | 14852.8 |
| alkaline phosphatase | AMED_RS34285 | Not Available | Negative | 7397430 - 7398986 | 56602.5 |
| penicillin acylase family protein | AMED_RS34290 | Not Available | Positive | 7399111 - 7401468 | 83361.9 |
| duf4233 domain-containing protein | AMED_RS34295 | Not Available | Negative | 7401533 - 7401931 | 14062.0 |
| bifunctional tetrahydrofolate synthase/dihydrofolate synthase | AMED_RS34300 | Not Available | Negative | 7401928 - 7403583 | 57869.1 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | AMED_RS34305 | Not Available | Positive | 7403657 - 7404292 | 22246.8 |
| sgnh/gdsl hydrolase family protein | AMED_RS34310 | Not Available | Positive | 7404364 - 7405233 | 29841.1 |
| alpha/beta fold hydrolase | AMED_RS34315 | Not Available | Negative | 7405217 - 7405993 | 27556.7 |
| alpha/beta fold hydrolase | AMED_RS34320 | Not Available | Negative | 7406005 - 7406769 | 27500.8 |
| lysr family transcriptional regulator | AMED_RS34325 | Not Available | Positive | 7406858 - 7407745 | 32407.1 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
