Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtpase obge | AMED_RS34230 | Not Available | Negative | 7382770 - 7384227 | 51241.0 |
| 50s ribosomal protein l27 | AMED_RS34235 | Not Available | Negative | 7384332 - 7384592 | 9129.93 |
| 50s ribosomal protein l21 | AMED_RS34240 | Not Available | Negative | 7384636 - 7384950 | 11285.7 |
| translation initiation factor if-2 n-terminal domain-containing protein | AMED_RS34245 | Not Available | Negative | 7385114 - 7388056 | 105377.0 |
| s8 family serine peptidase | AMED_RS34250 | Not Available | Positive | 7388604 - 7390031 | 48390.8 |
| abc transporter permease | AMED_RS34255 | Not Available | Negative | 7390108 - 7390929 | 29645.4 |
| abc transporter permease | AMED_RS34260 | Not Available | Negative | 7390930 - 7391733 | 28604.3 |
| abc transporter atp-binding protein | AMED_RS34265 | Not Available | Negative | 7391733 - 7392689 | 35307.3 |
| phosphodiester glycosidase family protein | AMED_RS34270 | Not Available | Negative | 7392720 - 7396001 | 111283.0 |
| maleylpyruvate isomerase family mycothiol-dependent enzyme | AMED_RS34275 | Not Available | Negative | 7396125 - 7396838 | 24940.4 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
