Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome silencing factor | AMED_RS34180 | Not Available | Negative | 7373240 - 7373635 | 14410.9 |
| nicotinate-nucleotide adenylyltransferase | AMED_RS34185 | Not Available | Negative | 7373696 - 7374289 | 22193.3 |
| recq family atp-dependent dna helicase | AMED_RS34190 | Not Available | Positive | 7374463 - 7376574 | 76010.5 |
| metal-dependent hydrolase | AMED_RS34195 | Not Available | Positive | 7376763 - 7377661 | 30987.3 |
| arginine--trna ligase | AMED_RS34200 | Not Available | Positive | 7377795 - 7379519 | 62219.9 |
| ppox class f420-dependent oxidoreductase | AMED_RS34205 | Not Available | Positive | 7379532 - 7379918 | 14360.2 |
| putative quinol monooxygenase | AMED_RS34210 | Not Available | Positive | 7379915 - 7380199 | 10282.1 |
| tetr/acrr family transcriptional regulator | AMED_RS34215 | Not Available | Negative | 7380169 - 7380768 | 21679.9 |
| sdr family oxidoreductase | AMED_RS34220 | Not Available | Positive | 7380830 - 7381543 | 24148.9 |
| glutamate 5-kinase | AMED_RS34225 | Not Available | Negative | 7381664 - 7382773 | 38069.2 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
