Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eama family transporter | AMED_RS34130 | Not Available | Negative | 7362400 - 7363263 | 29595.0 |
| 30s ribosomal protein s20 | AMED_RS34135 | Not Available | Positive | 7363596 - 7363856 | 9376.39 |
| dna polymerase iii subunit delta | AMED_RS34140 | Not Available | Negative | 7364089 - 7365069 | 34059.8 |
| threonine synthase | AMED_RS34145 | Not Available | Positive | 7365363 - 7366628 | 44815.3 |
| duf4231 domain-containing protein | AMED_RS34150 | Not Available | Positive | 7366752 - 7367258 | 18627.2 |
| comec/rec2 family competence protein | AMED_RS34155 | Not Available | Negative | 7367271 - 7369637 | 80607.0 |
| comea family dna-binding protein | AMED_RS34160 | Not Available | Negative | 7370188 - 7370898 | 24052.0 |
| degv family protein | AMED_RS34165 | Not Available | Negative | 7371035 - 7371892 | 29319.2 |
| diglucosylglycerate octanoyltransferase | AMED_RS34170 | Not Available | Negative | 7371897 - 7372625 | 25410.8 |
| histidine phosphatase family protein | AMED_RS34175 | Not Available | Negative | 7372629 - 7373243 | 22369.4 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
