Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS34080 | Not Available | Negative | 7353473 - 7353982 | 18979.5 |
| family 20 glycosylhydrolase | AMED_RS34085 | Not Available | Positive | 7354103 - 7355863 | 61400.2 |
| pentapeptide repeat-containing protein | AMED_RS34090 | Not Available | Positive | 7355935 - 7357161 | 44009.1 |
| hit family protein | AMED_RS34095 | Not Available | Positive | 7357186 - 7357596 | 14772.8 |
| pyridoxamine 5'-phosphate oxidase family protein | AMED_RS34100 | Not Available | Positive | 7357637 - 7358083 | 15913.9 |
| hypothetical protein | AMED_RS34105 | Not Available | Positive | 7358111 - 7358692 | 21146.8 |
| uma2 family endonuclease | AMED_RS34110 | Not Available | Negative | 7358699 - 7359268 | 20728.7 |
| translation elongation factor 4 | AMED_RS34115 | Not Available | Negative | 7359419 - 7361269 | 68235.1 |
| class i sam-dependent methyltransferase | AMED_RS34120 | Not Available | Positive | 7361385 - 7362005 | 21750.0 |
| voc family protein | AMED_RS34125 | Not Available | Negative | 7362002 - 7362376 | 13509.2 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
