Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| radical sam family heme chaperone hemw | AMED_RS33980 | Not Available | Negative | 7333688 - 7334905 | 42892.5 |
| voc family protein | AMED_RS33985 | Not Available | Negative | 7334967 - 7335383 | 14833.5 |
| nitrite/sulfite reductase | AMED_RS33990 | Not Available | Positive | 7335748 - 7337436 | 61549.3 |
| hypothetical protein | AMED_RS33995 | Not Available | Positive | 7337471 - 7337629 | 5862.87 |
| phosphoadenylyl-sulfate reductase | AMED_RS34000 | Not Available | Positive | 7337626 - 7338321 | 25126.5 |
| sulfate adenylyltransferase subunit cysd | AMED_RS34005 | Not Available | Positive | 7338333 - 7339253 | 34922.0 |
| sulfate adenylyltransferase subunit 1 | AMED_RS34010 | Not Available | Positive | 7339253 - 7340515 | 44790.2 |
| sirohydrochlorin chelatase | AMED_RS34015 | Not Available | Positive | 7340512 - 7341249 | 25465.5 |
| hypothetical protein | AMED_RS34020 | Not Available | Positive | 7341359 - 7341562 | 6993.71 |
| atp-binding protein | AMED_RS34025 | Not Available | Negative | 7341567 - 7345211 | 135885.0 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
