Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrilase-related carbon-nitrogen hydrolase | AMED_RS33930 | Not Available | Positive | 7324172 - 7324954 | 29157.2 |
| dihydropyrimidinase | AMED_RS33935 | Not Available | Positive | 7324954 - 7326336 | 48857.9 |
| tigr03842 family llm class f420-dependent oxidoreductase | AMED_RS33940 | Not Available | Positive | 7326344 - 7327342 | 36112.9 |
| alpha/beta fold hydrolase | AMED_RS33945 | Not Available | Positive | 7327414 - 7328874 | 51329.4 |
| serine hydrolase | AMED_RS33950 | Not Available | Negative | 7328853 - 7330082 | 44410.7 |
| siderophore-interacting protein | AMED_RS33955 | Not Available | Negative | 7330194 - 7331006 | 29873.2 |
| hypothetical protein | AMED_RS33960 | Not Available | Negative | 7331070 - 7331375 | 11368.6 |
| sgcj/ecac family oxidoreductase | AMED_RS33965 | Not Available | Negative | 7331399 - 7331809 | 14328.7 |
| tetr/acrr family transcriptional regulator | AMED_RS33970 | Not Available | Positive | 7331890 - 7332594 | 25654.8 |
| nadp-dependent oxidoreductase | AMED_RS33975 | Not Available | Negative | 7332708 - 7333628 | 32081.2 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
