Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldo/keto reductase | AMED_RS33880 | Not Available | Negative | 7313282 - 7314133 | 30434.5 |
| coa-acylating methylmalonate-semialdehyde dehydrogenase | AMED_RS33885 | Not Available | Negative | 7314209 - 7315699 | 52047.6 |
| pucr family transcriptional regulator | AMED_RS33890 | Not Available | Positive | 7315834 - 7317471 | 56994.4 |
| ssi family serine proteinase inhibitor | AMED_RS33895 | Not Available | Positive | 7317500 - 7317862 | 12523.9 |
| helix-turn-helix transcriptional regulator | AMED_RS33900 | Not Available | Positive | 7317931 - 7318767 | 30933.6 |
| duf397 domain-containing protein | AMED_RS33905 | Not Available | Positive | 7318769 - 7318984 | 7605.8 |
| duf4153 domain-containing protein | AMED_RS33910 | Not Available | Negative | 7319016 - 7320611 | 55442.2 |
| atp-binding protein | AMED_RS33915 | Not Available | Negative | 7320694 - 7321686 | 35545.0 |
| response regulator transcription factor | AMED_RS33920 | Not Available | Negative | 7321683 - 7322375 | 24994.3 |
| ncs1 family nucleobase:cation symporter-1 | AMED_RS33925 | Not Available | Positive | 7322596 - 7324161 | 56494.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
