Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rrna maturation rnase ybey | AMED_RS33830 | Not Available | Negative | 7305238 - 7305810 | 20501.3 |
| phoh family protein | AMED_RS33835 | Not Available | Negative | 7305807 - 7306874 | 38381.1 |
| histidine triad nucleotide-binding protein | AMED_RS33840 | Not Available | Negative | 7306962 - 7307330 | 13228.5 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | AMED_RS33845 | Not Available | Negative | 7307687 - 7308439 | 26111.4 |
| molecular chaperone dnaj | AMED_RS33850 | Not Available | Negative | 7308443 - 7309612 | 40842.4 |
| heat-inducible transcriptional repressor hrca | AMED_RS33855 | Not Available | Negative | 7309644 - 7310669 | 37107.6 |
| ybab/ebfc family nucleoid-associated protein | AMED_RS33860 | Not Available | Positive | 7310880 - 7311299 | 14859.6 |
| type vii secretion target | AMED_RS33865 | Not Available | Positive | 7311299 - 7311616 | 11234.3 |
| hypothetical protein | AMED_RS33870 | Not Available | Positive | 7311613 - 7312794 | 41152.0 |
| hypothetical protein | AMED_RS33875 | Not Available | Positive | 7312791 - 7313285 | 17825.6 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
