Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine--trna ligase | AMED_RS33730 | Not Available | Negative | 7289487 - 7290875 | 52806.2 |
| class f sortase | AMED_RS33735 | Not Available | Negative | 7290966 - 7291619 | 22649.7 |
| class f sortase | AMED_RS33740 | Not Available | Negative | 7291699 - 7292346 | 22347.6 |
| hypothetical protein | AMED_RS33745 | Not Available | Negative | 7292347 - 7293435 | 36766.7 |
| helix-turn-helix transcriptional regulator | AMED_RS33750 | Not Available | Positive | 7293709 - 7294074 | 12660.3 |
| fur family transcriptional regulator | AMED_RS33755 | Not Available | Positive | 7294074 - 7294487 | 15158.7 |
| hypothetical protein | AMED_RS33760 | Not Available | Negative | 7294484 - 7295251 | 27123.7 |
| tigr03943 family putative permease subunit | AMED_RS33765 | Not Available | Negative | 7295303 - 7296040 | 25790.9 |
| permease | AMED_RS33770 | Not Available | Negative | 7296037 - 7297050 | 34824.9 |
| hypothetical protein | AMED_RS33775 | Not Available | Negative | 7297171 - 7297596 | 14574.4 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
