Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | AMED_RS33680 | Not Available | Positive | 7279568 - 7280167 | 21928.4 |
| dinb family protein | AMED_RS33685 | Not Available | Negative | 7280175 - 7280711 | 19887.1 |
| glycosyl transferase | AMED_RS33690 | Not Available | Negative | 7280727 - 7282343 | 58047.9 |
| serpin family protein | AMED_RS33695 | Not Available | Negative | 7282534 - 7283628 | 38686.4 |
| deoxyguanosinetriphosphate triphosphohydrolase | AMED_RS33700 | Not Available | Negative | 7283810 - 7285084 | 45432.9 |
| ydcf family protein | AMED_RS33705 | Not Available | Negative | 7285117 - 7285770 | 23522.3 |
| dna-binding response regulator | AMED_RS33710 | Not Available | Negative | 7285795 - 7286400 | 20907.2 |
| sensor histidine kinase | AMED_RS33715 | Not Available | Negative | 7286397 - 7287599 | 43037.3 |
| abc transporter permease | AMED_RS33720 | Not Available | Negative | 7287619 - 7288359 | 26649.6 |
| abc transporter atp-binding protein | AMED_RS33725 | Not Available | Negative | 7288356 - 7289288 | 32439.1 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
