Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pig-l deacetylase family protein | AMED_RS03280 | Not Available | Positive | 688397 - 689164 | 27459.1 |
| alpha/beta hydrolase | AMED_RS03285 | Not Available | Positive | 689241 - 690173 | 33520.1 |
| mfs transporter | AMED_RS03290 | Not Available | Positive | 690470 - 691978 | 50899.4 |
| tetr/acrr family transcriptional regulator | AMED_RS03295 | Not Available | Positive | 692064 - 692792 | 27051.0 |
| pyridoxamine 5'-phosphate oxidase family protein | AMED_RS03300 | Not Available | Negative | 692799 - 693287 | 18304.6 |
| cytochrome p450 | AMED_RS03305 | Not Available | Negative | 693384 - 694595 | 44720.5 |
| cytochrome p450 | AMED_RS03310 | Not Available | Negative | 694626 - 695891 | 46593.0 |
| lipopolysaccharide biosynthesis protein rfbh | AMED_RS03315 | Not Available | Negative | 695965 - 697272 | 47468.6 |
| glycosyltransferase | AMED_RS03320 | Not Available | Positive | 697409 - 698620 | 43008.4 |
| dtdp-4-dehydrorhamnose 3,5-epimerase family protein | AMED_RS03325 | Not Available | Positive | 698651 - 699271 | 22531.9 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
