Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS48125 | Not Available | Positive | 7271116 - 7271286 | 6142.75 |
| trans-aconitate 2-methyltransferase | AMED_RS33635 | Not Available | Negative | 7271276 - 7272043 | 28005.0 |
| hypothetical protein | AMED_RS33640 | Not Available | Negative | 7272092 - 7272613 | 18149.8 |
| dna primase | AMED_RS33645 | Not Available | Negative | 7272615 - 7274528 | 69250.6 |
| sigma-70 family rna polymerase sigma factor | AMED_RS33650 | Not Available | Positive | 7274579 - 7275532 | 33786.6 |
| abc transporter permease | AMED_RS33655 | Not Available | Negative | 7275504 - 7276274 | 26173.1 |
| carboxymuconolactone decarboxylase family protein | AMED_RS33660 | Not Available | Negative | 7276338 - 7276904 | 20737.0 |
| mfs transporter | AMED_RS33665 | Not Available | Negative | 7276927 - 7278285 | 45044.5 |
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS33670 | Not Available | Positive | 7278310 - 7278759 | 16350.2 |
| carboxymuconolactone decarboxylase family protein | AMED_RS33675 | Not Available | Negative | 7278756 - 7279466 | 25311.0 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
