Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| family 1 encapsulin nanocompartment shell protein | AMED_RS33590 | Not Available | Positive | 7262840 - 7263658 | 29166.4 |
| zinc-dependent alcohol dehydrogenase | AMED_RS33595 | Not Available | Negative | 7264133 - 7265347 | 42456.3 |
| Trna-tyr | Not Available | Not Available | Positive | 7265565 - 7265649 | Not Available |
| hypothetical protein | AMED_RS48120 | Not Available | Negative | 7265723 - 7265863 | 4832.06 |
| hypothetical protein | AMED_RS33605 | Not Available | Negative | 7266275 - 7266496 | 7845.05 |
| cbs domain-containing protein | AMED_RS33610 | Not Available | Positive | 7266561 - 7267007 | 15935.6 |
| slc13 family permease | AMED_RS33615 | Not Available | Positive | 7267030 - 7268322 | 45495.7 |
| abc transporter atp-binding protein | AMED_RS33620 | Not Available | Positive | 7268447 - 7269352 | 32609.3 |
| abc transporter permease | AMED_RS33625 | Not Available | Positive | 7269349 - 7270128 | 26843.2 |
| Trna-asn | Not Available | Not Available | Positive | 7270874 - 7270949 | Not Available |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
