Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fusc family protein | AMED_RS33540 | Not Available | Negative | 7249376 - 7250443 | 37000.8 |
| thiamine pyrophosphate-requiring protein | AMED_RS33545 | Not Available | Positive | 7250644 - 7252437 | 64693.3 |
| enolase c-terminal domain-like protein | AMED_RS33550 | Not Available | Positive | 7252434 - 7253534 | 39050.3 |
| fad-binding and (fe-s)-binding domain-containing protein | AMED_RS33555 | Not Available | Positive | 7253546 - 7256515 | 108451.0 |
| chab family protein | AMED_RS33560 | Not Available | Positive | 7256515 - 7256913 | 14672.2 |
| hypothetical protein | AMED_RS33565 | Not Available | Negative | 7257267 - 7257512 | 8975.35 |
| nad(p)-dependent oxidoreductase | AMED_RS33570 | Not Available | Positive | 7257587 - 7258471 | 30333.3 |
| acetate/propionate family kinase | AMED_RS33575 | Not Available | Negative | 7258816 - 7259901 | 38507.0 |
| phosphoketolase family protein | AMED_RS33580 | Not Available | Negative | 7259889 - 7262183 | 82576.9 |
| hemerythrin domain-containing protein | AMED_RS33585 | Not Available | Positive | 7262287 - 7262838 | 20711.7 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
