Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS33495 | Not Available | Negative | 7240098 - 7240580 | 17603.3 |
| molybdopterin oxidoreductase family protein | AMED_RS33500 | Not Available | Negative | 7240577 - 7241584 | 37126.0 |
| hypothetical protein | AMED_RS49580 | Not Available | Negative | 7241671 - 7241793 | 4262.99 |
| zinc ribbon-containing protein | AMED_RS33505 | Not Available | Negative | 7241992 - 7242153 | 5708.76 |
| glutathione-independent formaldehyde dehydrogenase | AMED_RS33510 | Not Available | Negative | 7242185 - 7243321 | 40642.2 |
| gaf and antar domain-containing protein | AMED_RS33515 | Not Available | Positive | 7244029 - 7244760 | 26110.7 |
| zinc-binding dehydrogenase | AMED_RS33520 | Not Available | Negative | 7244945 - 7245895 | 33178.9 |
| ppox class f420-dependent oxidoreductase | AMED_RS33525 | Not Available | Positive | 7246024 - 7246461 | 16386.3 |
| l-dopachrome tautomerase-related protein | AMED_RS33530 | Not Available | Positive | 7246636 - 7247754 | 40718.3 |
| aldehyde dehydrogenase family protein | AMED_RS33535 | Not Available | Positive | 7247827 - 7249287 | 50913.0 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
