Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gaf and antar domain-containing protein | AMED_RS33445 | Not Available | Negative | 7233095 - 7233835 | 26425.1 |
| hypothetical protein | AMED_RS33450 | Not Available | Positive | 7233979 - 7234212 | 9065.92 |
| duf2188 domain-containing protein | AMED_RS33455 | Not Available | Negative | 7234246 - 7234467 | 8072.42 |
| hypothetical protein | AMED_RS33460 | Not Available | Negative | 7234664 - 7235149 | 17963.6 |
| gaf and antar domain-containing protein | AMED_RS33465 | Not Available | Positive | 7235332 - 7236045 | 25032.9 |
| pp2c family protein-serine/threonine phosphatase | AMED_RS33470 | Not Available | Positive | 7236051 - 7237487 | 51478.9 |
| osmc family protein | AMED_RS33475 | Not Available | Negative | 7237794 - 7238234 | 15270.8 |
| hypothetical protein | AMED_RS33480 | Not Available | Positive | 7238569 - 7238811 | 8806.99 |
| duf6766 family protein | AMED_RS33485 | Not Available | Negative | 7238900 - 7239583 | 24639.1 |
| hypothetical protein | AMED_RS33490 | Not Available | Negative | 7239666 - 7240073 | 13658.1 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
