Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heavy-metal-associated domain-containing protein | AMED_RS33345 | Not Available | Negative | 7215133 - 7215339 | 7144.5 |
| sigma-70 family rna polymerase sigma factor | AMED_RS33350 | Not Available | Positive | 7215486 - 7216061 | 20904.8 |
| sigma-70 family rna polymerase sigma factor | AMED_RS33355 | Not Available | Negative | 7216069 - 7216641 | 21028.5 |
| zf-hc2 domain-containing protein | AMED_RS33360 | Not Available | Positive | 7216704 - 7217441 | 26251.8 |
| dj-1/pfpi family protein | AMED_RS33365 | Not Available | Positive | 7217495 - 7218106 | 21646.7 |
| abc transporter atp-binding protein | AMED_RS33370 | Not Available | Negative | 7218108 - 7218878 | 27026.6 |
| iron abc transporter permease | AMED_RS33375 | Not Available | Negative | 7218875 - 7219948 | 35376.7 |
| abc transporter substrate-binding protein | AMED_RS33380 | Not Available | Negative | 7219945 - 7220919 | 32403.7 |
| copper resistance copc family protein | AMED_RS33385 | Not Available | Negative | 7221003 - 7221566 | 18554.1 |
| cation-translocating p-type atpase | AMED_RS33390 | Not Available | Negative | 7221563 - 7223833 | 78111.5 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
