Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | AMED_RS33290 | Not Available | Positive | 7204266 - 7205111 | 30116.8 |
| nad(p)-dependent oxidoreductase | AMED_RS33295 | Not Available | Positive | 7205114 - 7205839 | 25509.7 |
| nuclear transport factor 2 family protein | AMED_RS33300 | Not Available | Negative | 7205887 - 7206948 | 37265.8 |
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS33305 | Not Available | Negative | 7206975 - 7207472 | 18126.5 |
| glxa family transcriptional regulator | AMED_RS33310 | Not Available | Negative | 7208027 - 7208962 | 33391.4 |
| hd domain-containing protein | AMED_RS33315 | Not Available | Positive | 7209035 - 7209691 | 23371.6 |
| rida family protein | AMED_RS33320 | Not Available | Positive | 7209837 - 7210250 | 15309.3 |
| hypothetical protein | AMED_RS33325 | Not Available | Negative | 7210521 - 7210760 | 8563.1 |
| gaf and antar domain-containing protein | AMED_RS33330 | Not Available | Positive | 7211388 - 7212116 | 25806.2 |
| cation-translocating p-type atpase | AMED_RS33340 | Not Available | Negative | 7212716 - 7214932 | 77018.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
