Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS33240 | Not Available | Negative | 7195367 - 7195942 | 19612.0 |
| luxr c-terminal-related transcriptional regulator | AMED_RS33245 | Not Available | Negative | 7196249 - 7196584 | 12268.8 |
| tetr/acrr family transcriptional regulator | AMED_RS33250 | Not Available | Negative | 7196624 - 7197259 | 23170.6 |
| nmra family nad(p)-binding protein | AMED_RS33255 | Not Available | Positive | 7197339 - 7198184 | 29089.8 |
| sdr family oxidoreductase | AMED_RS33260 | Not Available | Positive | 7198238 - 7199110 | 31090.5 |
| cupin domain-containing protein | AMED_RS33265 | Not Available | Positive | 7199139 - 7199660 | 19099.2 |
| dj-1/pfpi family protein | AMED_RS33270 | Not Available | Negative | 7199768 - 7200418 | 22092.5 |
| alpha/beta hydrolase | AMED_RS33275 | Not Available | Negative | 7200484 - 7201551 | 37713.7 |
| alpha/beta hydrolase | AMED_RS33280 | Not Available | Positive | 7201877 - 7202827 | 32982.5 |
| dha2 family efflux mfs transporter permease subunit | AMED_RS33285 | Not Available | Positive | 7202845 - 7204269 | 48616.0 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
