Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m56 family metallopeptidase | AMED_RS33185 | Not Available | Positive | 7184534 - 7185469 | 32156.2 |
| septal ring lytic transglycosylase rlpa family protein | AMED_RS33190 | Not Available | Positive | 7185729 - 7187039 | 42538.9 |
| alkaline phosphatase family protein | AMED_RS33195 | Not Available | Negative | 7187089 - 7188720 | 56188.1 |
| hypothetical protein | AMED_RS33200 | Not Available | Positive | 7189009 - 7189461 | 16157.5 |
| abc transporter atp-binding protein | AMED_RS33205 | Not Available | Positive | 7189499 - 7190425 | 32609.6 |
| abc transporter permease subunit | AMED_RS33210 | Not Available | Positive | 7190425 - 7191273 | 29620.6 |
| sensor histidine kinase | AMED_RS33215 | Not Available | Positive | 7191295 - 7192542 | 43726.6 |
| response regulator | AMED_RS33220 | Not Available | Positive | 7192539 - 7193210 | 24040.1 |
| hypothetical protein | AMED_RS33225 | Not Available | Negative | 7193425 - 7194174 | 27001.5 |
| chemotaxis protein cheb | AMED_RS33230 | Not Available | Positive | 7194624 - 7195022 | 13742.7 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
