Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i polyketide synthase | AMED_RS03230 | Not Available | Positive | 669678 - 679919 | 353753.0 |
| arylamine n-acetyltransferase | AMED_RS03235 | Not Available | Positive | 679916 - 680698 | 29194.1 |
| hypothetical protein | AMED_RS03240 | Not Available | Positive | 680718 - 680906 | 7047.49 |
| 3-dehydroquinate synthase | AMED_RS03245 | Not Available | Positive | 680903 - 681958 | 36932.6 |
| 3-deoxy-7-phosphoheptulonate synthase | AMED_RS03250 | Not Available | Positive | 681955 - 683280 | 47418.0 |
| shikimate dehydrogenase | AMED_RS03255 | Not Available | Positive | 683300 - 684091 | 27464.1 |
| 3-amino-5-hydroxybenzoate synthase | AMED_RS03260 | Not Available | Positive | 684231 - 685397 | 42213.0 |
| gfo/idh/moca family protein | AMED_RS03265 | Not Available | Positive | 685625 - 686701 | 37935.1 |
| had-ia family hydrolase | AMED_RS03270 | Not Available | Positive | 686716 - 687414 | 24855.9 |
| kanosamine kinase | AMED_RS03275 | Not Available | Positive | 687419 - 688330 | 30825.0 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
