Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coce/nond family hydrolase | AMED_RS33080 | Not Available | Positive | 7167410 - 7169131 | 60643.4 |
| mfs transporter | AMED_RS33085 | Not Available | Positive | 7169162 - 7170499 | 47189.2 |
| discoidin domain-containing protein | AMED_RS33090 | Not Available | Positive | 7170659 - 7172317 | 59373.9 |
| muconolactone delta-isomerase family protein | AMED_RS33095 | Not Available | Negative | 7172404 - 7172604 | 7282.65 |
| stas domain-containing protein | AMED_RS33100 | Not Available | Positive | 7173080 - 7173493 | 15084.6 |
| stas domain-containing protein | AMED_RS33105 | Not Available | Positive | 7173819 - 7174133 | 11219.7 |
| sensor histidine kinase | AMED_RS33110 | Not Available | Positive | 7174130 - 7175068 | 33846.2 |
| atp-binding protein | AMED_RS33115 | Not Available | Positive | 7175167 - 7175607 | 15870.7 |
| helix-turn-helix domain-containing protein | AMED_RS33120 | Not Available | Positive | 7175789 - 7176220 | 15514.5 |
| atp-binding cassette domain-containing protein | AMED_RS33125 | Not Available | Positive | 7176365 - 7177303 | 32893.5 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
