Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | AMED_RS33030 | Not Available | Positive | 7151839 - 7153497 | 60328.3 |
| poly(3-hydroxyalkanoate) depolymerase | AMED_RS33035 | Not Available | Positive | 7153494 - 7154309 | 28774.4 |
| long-chain fatty acid--coa ligase | AMED_RS33040 | Not Available | Positive | 7154303 - 7155808 | 53877.6 |
| alpha/beta fold hydrolase | AMED_RS33045 | Not Available | Negative | 7155789 - 7156703 | 32963.0 |
| tetr/acrr family transcriptional regulator | AMED_RS33050 | Not Available | Positive | 7157142 - 7158014 | 31285.1 |
| alpha/beta fold hydrolase | AMED_RS33055 | Not Available | Negative | 7158054 - 7158743 | 23755.9 |
| aaa family atpase | AMED_RS33060 | Not Available | Negative | 7158829 - 7161558 | 95675.2 |
| aaa family atpase | AMED_RS33065 | Not Available | Negative | 7161555 - 7164233 | 95306.9 |
| mfs transporter | AMED_RS33070 | Not Available | Positive | 7164448 - 7165848 | 47055.6 |
| coce/nond family hydrolase | AMED_RS33075 | Not Available | Positive | 7165845 - 7167413 | 56266.3 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
