Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan-binding protein | AMED_RS32980 | Not Available | Positive | 7138937 - 7139407 | 15881.9 |
| nitroreductase/quinone reductase family protein | AMED_RS32985 | Not Available | Negative | 7139620 - 7139772 | 5494.59 |
| nuclear transport factor 2 family protein | AMED_RS32990 | Not Available | Negative | 7139875 - 7140321 | 16101.2 |
| aldo/keto reductase | AMED_RS32995 | Not Available | Negative | 7140362 - 7141342 | 34834.7 |
| mbl fold metallo-hydrolase | AMED_RS33000 | Not Available | Negative | 7141320 - 7142369 | 37755.7 |
| luxr c-terminal-related transcriptional regulator | AMED_RS33005 | Not Available | Positive | 7142476 - 7145025 | 90841.1 |
| molybdopterin cofactor-binding domain-containing protein | AMED_RS33010 | Not Available | Negative | 7145047 - 7147644 | 91029.0 |
| hypothetical protein | AMED_RS33015 | Not Available | Negative | 7147700 - 7147936 | 8660.25 |
| luxr c-terminal-related transcriptional regulator | AMED_RS33020 | Not Available | Negative | 7148033 - 7150597 | 92028.4 |
| acyl-coa dehydrogenase family protein | AMED_RS33025 | Not Available | Positive | 7150657 - 7151823 | 42564.0 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
