Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS32885 | Not Available | Negative | 7119103 - 7119615 | 18163.2 |
| response regulator transcription factor | AMED_RS32890 | Not Available | Negative | 7119740 - 7120384 | 22809.6 |
| hypothetical protein | AMED_RS32895 | Not Available | Negative | 7120535 - 7121155 | 20647.7 |
| g1 family glutamic endopeptidase | AMED_RS32900 | Not Available | Negative | 7121191 - 7122033 | 29186.6 |
| afsr/sarp family transcriptional regulator | AMED_RS32905 | Not Available | Negative | 7122149 - 7122925 | 27801.6 |
| effector-associated constant component eacc1 | AMED_RS32910 | Not Available | Positive | 7123093 - 7123326 | 7989.68 |
| hypothetical protein | AMED_RS32915 | Not Available | Positive | 7123474 - 7123968 | 17507.0 |
| acyltransferase family protein | AMED_RS32920 | Not Available | Negative | 7124031 - 7126148 | 75919.5 |
| hypothetical protein | AMED_RS49045 | Not Available | Negative | 7126571 - 7126990 | 16098.5 |
| metal-dependent hydrolase | AMED_RS49050 | Not Available | Negative | 7127153 - 7127268 | 4009.73 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
