Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endo-1,4-beta-xylanase | AMED_RS32835 | Not Available | Negative | 7109030 - 7110487 | 51047.5 |
| dead/deah box helicase family protein | AMED_RS32840 | Not Available | Positive | 7110895 - 7113108 | 81891.6 |
| hypothetical protein | AMED_RS32845 | Not Available | Negative | 7113142 - 7114164 | 34950.7 |
| rna polymerase sigma factor | AMED_RS32850 | Not Available | Negative | 7114194 - 7114748 | 20399.1 |
| hypothetical protein | AMED_RS32855 | Not Available | Negative | 7115083 - 7115424 | 12479.1 |
| amidohydrolase family protein | AMED_RS49730 | Not Available | Positive | 7115820 - 7116065 | 8263.92 |
| metal-dependent hydrolase | AMED_RS32865 | Not Available | Negative | 7116064 - 7116660 | 22593.1 |
| ketopantoate reductase family protein | AMED_RS32870 | Not Available | Negative | 7116657 - 7117619 | 35428.8 |
| tetr/acrr family transcriptional regulator | AMED_RS32875 | Not Available | Positive | 7117709 - 7118287 | 20550.3 |
| hypothetical protein | AMED_RS32880 | Not Available | Positive | 7118320 - 7119090 | 27894.6 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
