Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS32780 | Not Available | Negative | 7094834 - 7095943 | 38575.8 |
| trypsin-like peptidase domain-containing protein | AMED_RS32785 | Not Available | Negative | 7095940 - 7097127 | 42531.6 |
| aaa family atpase | AMED_RS32790 | Not Available | Negative | 7097124 - 7100183 | 111094.0 |
| hypothetical protein | AMED_RS32795 | Not Available | Negative | 7100180 - 7101232 | 38425.5 |
| hsp70 family protein | AMED_RS32800 | Not Available | Negative | 7101372 - 7103681 | 83328.6 |
| hypothetical protein | AMED_RS32805 | Not Available | Negative | 7103678 - 7104007 | 11694.8 |
| hypothetical protein | AMED_RS32815 | Not Available | Negative | 7104259 - 7104864 | 22066.1 |
| amidohydrolase family protein | AMED_RS32820 | Not Available | Negative | 7104843 - 7105883 | 35327.6 |
| tetr/acrr family transcriptional regulator | AMED_RS32825 | Not Available | Positive | 7105944 - 7106519 | 20611.3 |
| ricin-type beta-trefoil lectin domain protein | AMED_RS32830 | Not Available | Negative | 7106604 - 7108988 | 82138.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
