Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin domain-containing protein | AMED_RS32730 | Not Available | Positive | 7084302 - 7085030 | 25739.3 |
| duf1996 domain-containing protein | AMED_RS32735 | Not Available | Positive | 7085294 - 7087072 | 62086.9 |
| glycoside hydrolase family 43 protein | AMED_RS32740 | Not Available | Positive | 7087140 - 7088570 | 51545.8 |
| hypothetical protein | AMED_RS32745 | Not Available | Positive | 7089045 - 7089701 | 23276.3 |
| hypothetical protein | AMED_RS32750 | Not Available | Positive | 7089806 - 7090345 | 19393.0 |
| rna polymerase sigma factor | AMED_RS32755 | Not Available | Negative | 7090399 - 7091613 | 42971.8 |
| ycii family protein | AMED_RS32760 | Not Available | Negative | 7091633 - 7091995 | 12891.3 |
| alpha/beta fold hydrolase | AMED_RS32765 | Not Available | Negative | 7092109 - 7092963 | 30749.1 |
| tetr/acrr family transcriptional regulator | AMED_RS32770 | Not Available | Negative | 7093087 - 7093671 | 21236.2 |
| nadp-dependent oxidoreductase | AMED_RS32775 | Not Available | Positive | 7093796 - 7094815 | 37299.0 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
