Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | AMED_RS32680 | Not Available | Positive | 7075515 - 7077914 | 85929.8 |
| roadblock/lc7 domain-containing protein | AMED_RS32685 | Not Available | Positive | 7077968 - 7078393 | 15028.1 |
| duf742 domain-containing protein | AMED_RS32690 | Not Available | Positive | 7078390 - 7078761 | 13210.0 |
| atp/gtp-binding protein | AMED_RS32695 | Not Available | Positive | 7078778 - 7079335 | 20236.7 |
| hypothetical protein | AMED_RS32700 | Not Available | Positive | 7079648 - 7080598 | 34696.0 |
| hypothetical protein | AMED_RS32705 | Not Available | Positive | 7080620 - 7081249 | 23909.9 |
| hypothetical protein | AMED_RS32710 | Not Available | Positive | 7081246 - 7082067 | 29370.7 |
| rna polymerase sigma-70 factor | AMED_RS32715 | Not Available | Negative | 7082359 - 7083231 | 31977.7 |
| doxx family protein | AMED_RS32720 | Not Available | Negative | 7083368 - 7083622 | 8284.39 |
| tetr/acrr family transcriptional regulator | AMED_RS32725 | Not Available | Positive | 7083727 - 7084284 | 19756.6 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
