Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS03180 | Not Available | Positive | 623904 - 624881 | 34408.8 |
| hypothetical protein | AMED_RS03185 | Not Available | Negative | 624898 - 626142 | 44096.8 |
| gfo/idh/moca family protein | AMED_RS03190 | Not Available | Positive | 626217 - 627209 | 34155.2 |
| gfo/idh/moca family protein | AMED_RS03195 | Not Available | Positive | 627206 - 627973 | 26095.9 |
| duf5988 family protein | AMED_RS03200 | Not Available | Positive | 628162 - 628377 | 7629.01 |
| cytochrome p450 | AMED_RS03205 | Not Available | Positive | 628410 - 629600 | 44296.2 |
| type i polyketide synthase | AMED_RS03210 | Not Available | Positive | 629641 - 643848 | 495246.0 |
| type i polyketide synthase | AMED_RS03215 | Not Available | Positive | 643882 - 659064 | 526617.0 |
| type i polyketide synthase | AMED_RS03220 | Not Available | Positive | 659074 - 664365 | 182833.0 |
| type i polyketide synthase | AMED_RS03225 | Not Available | Positive | 664444 - 669630 | 180066.0 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
